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GrainGenes Marker Report: k06232

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Locus	k06232
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 109.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK43M01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = RWACACACTGRAAACCAGCGA Parent 1 SNP sequence = ATACACACTGAAAACCAGCGA Parent 2 SNP sequence = GAACACACTGGAAACCAGCGA
Probe for Locus	BaAK43M01
Locus	k06232
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = malate dehydrogenase [Lolium perenne]
Type	PCR
PCR primers	Left 5' - TCTTCCCCAAATCTGAGCAT Right 5' - CAGAAGCCGCAGAAGAAGAA
Sequence	BJ461137
PCR size	250