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GrainGenes Marker Report: k04598

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Locus	k04598
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 277
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah57d15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = AATTCTGCTGYGTTCCAGTTA Parent 1 SNP sequence = AATTCTGCTGCGTTCCAGTTA Parent 2 SNP sequence = AATTCTGCTGTGTTCCAGTTA
Probe for Locus	bah57d15
Locus	k04598
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative glucose inhibited division protein A [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CATCCAGCACAAAACACTGG Right 5' - TTCCTGGTGGAGGTCAAGTC
Sequence	BJ468124
PCR size	380