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GrainGenes Marker Report: k03820

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Locus	k03820
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 193.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah21a16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = GGTGCTCCTCYGACCACCACG Parent 1 SNP sequence = GGTGCTCCTCTGACCACCACG Parent 2 SNP sequence = GGTGCTCCTCCGACCACCACG
Probe for Locus	bah21a16
Locus	k03820
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = cyclic nucleotide-regulated ion channel, putative (CNGC17) [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TAGTTCGGCTCGAGGACACT Right 5' - GGCGACGGAATTGAGTACAT
PCR size	352