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GrainGenes Marker Report: k03507

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Locus	k03507
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 78.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags9h03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = ACAAAGTCCGYCGCAGAGCTT Parent 1 SNP sequence = ACAAAGTCCGTCGCAGAGCTT Parent 2 SNP sequence = ACAAAGTCCGCCGCAGAGCTT
Probe for Locus	bags9h03
Locus	k03507
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Na+/H+ antiporter [Deschampsia antarctica]
Type	PCR
PCR primers	Left 5' - ACTTCGACAAAGGACGCTGT Right 5' - CTACTACCGCCAGAAGCCAC
Sequence	AV920142
PCR size	440