Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k03179

[Submit comment/correction]

Locus	k03179
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 163.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags39p06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = TCGGCCCATTYCCGCAGGGCC Parent 1 SNP sequence = TCGGCCCATTCCCGCAGGGCC Parent 2 SNP sequence = TCGGCCCATTTCCGCAGGGCC
Probe for Locus	bags39p06
Locus	k03179
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative glucosyltransferase [Oryza sativa (japonica cultivar-group)] dbj BAB92271.1 putative glucosyltransferase [Oryza sativa (japonica c
Type	PCR
PCR primers	Left 5' - ATTTCAGCCCGTATGACTCG Right 5' - TATGGTTGCTTCGTGATGGA
Sequence	BJ468715
PCR size	350