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GrainGenes Marker Report: k02829

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Locus	k02829
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 114.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags30m11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = AGCATTTGTGSCGATGTCTCC Parent 1 SNP sequence = AGCATTTGTGCCGATGTCTCC Parent 2 SNP sequence = AGCATTTGTGGCGATGTCTCC
Probe for Locus	bags30m11
Locus	k02829
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Hypothetical protein [Oryza sativa (japonica cultivar-group)] gb AAN52749.1 Hypothetical protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AACCGTCATTTCTGCAGGTC Right 5' - AGCCGAGAAAGTGGACAAGA
Sequence	BJ468023
PCR size	393