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GrainGenes Marker Report: k02464

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Locus	k02464
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 133.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags20h21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GAGCAATTCARAGACCACAGA Parent 1 SNP sequence = GAGCAATTCAGAGACCACAGA Parent 2 SNP sequence = GAGCAATTCAAAGACCACAGA
Probe for Locus	bags20h21
Locus	k02464
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0064H22.8 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGCACACGAACATAGCACAA Right 5' - GTCATGTCCGGGAAAGAGG
Sequence	AV918275
PCR size	360