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GrainGenes Marker Report: k02407

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Locus	k02407
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 178.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags20l15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = GTACAACCGTYTCCACCGTAC Parent 1 SNP sequence = GTACAACCGTTTCCACCGTAC Parent 2 SNP sequence = GTACAACCGTCTCCACCGTAC
Probe for Locus	bags20l15
Locus	k02407
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative DNA-binding protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CACACACTCGACGTTCAGAGA Right 5' - AGAAGGGCATCATGGACAAG
Sequence	AV918342
PCR size	431