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GrainGenes Marker Report: k02018

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Locus	k02018
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 104.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags11o14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = GAACCAGATAYCATGGTGTAT Parent 1 SNP sequence = GAACCAGATACCATGGTGTAT Parent 2 SNP sequence = GAACCAGATATCATGGTGTAT
Probe for Locus	bags11o14
Locus	k02018
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative RIC1_ORYSA RAS-RELATED PROTEIN RIC1 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AGCATGAAGGCCTTGAACAC Right 5' - ACTACGACATCCACCCGTTC
Sequence	AV917874
PCR size	359