Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k00700

[Submit comment/correction]

Locus	k00700
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 268.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak40p22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = ATATGGCACCSATACAACCCT Parent 1 SNP sequence = ATATGGCACCCATACAACCCT Parent 2 SNP sequence = ATATGGCACCGATACAACCCT
Probe for Locus	baak40p22
Locus	k00700
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hypothetical protein F15G16.160 - Arabidopsis thaliana emb CAB71107.1 putative protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - ATTTCGTTGGGTGACGTTTC Right 5' - CTTGCAAAGGATTGGTGCTT
Sequence	BJ460484
PCR size	353