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GrainGenes Marker Report: cfe0143

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Locus
cfe0143
Type
Microsatellite
Map
Barley, B73xCPI-5H162.3
[ Show Nearby Loci ]
Map Data
Barley, B73xCPI
Probe
CFE143



Probe for Locus
CFE143
Locus
cfe0143
Reference
ReferenceHearnden PR et al. (2007) A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theoretical and Applied Genetics 115:383-391.
ReferenceZhang LY et al. (2005) High transferability of bread wheat EST-derived SSRs to other cereals Theoretical and Applied Genetics 111:677-687.
General Remarks
SSR motif: (CAGG)4
Type
PCR
SSR
EST
PCR primers
CGACTAACGACCAAAGCACA
CATCCACACCCACAAGGAG
Left CGACTAACGACCAAAGCACA
Right CATCCACACCCACAAGGAG
SSR size
150 theoretical; 166 observed
Amplification Conditions
Annealing temperature 59.9
Sequence
BE426772
CD904199
CD906283
CD906594
Linkage Group
5D
Source Species
Triticum aestivum