GrainGenes Marker Report: cdo1090d
Locus
cdo1090d
Type
RFLP
Map
Oat-2001-KxM_22 2 Oat-2004-P39xP48_5 0 Oat-2004-P48xP38_3 0 Oat-KxO/2003-16_23 32 Oat-OxT-34 93
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003 Oat, OxT Oat-2001-KxM Oat-2004-P39xP48 Oat-2004-P48xP38
Species
Avena sativa
Probe
CDO1090
Homology
CAA67191.1 e-value: 2e-12 (X98582) HSP80-2 [Triticum aestivum] HS82_ORYSA e-value: 1e-43 HEAT SHOCK PROTEIN 82
Reference
Remark
Marker placement value = 1.00 cM on map Oat-KxO/2003-16_23 Marker is not a framework marker on map Oat-KxO/2003-16_23
Possible Orthologs
cdo1090
[ Show all 20 ]
Probe for Locus
CDO1090
Locus
Xcdo1090-2A
[ Show all 21 ]
Related Probe
CDO57
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Wight CP et al. (2004) Discovery, localization, and sequence characterization of molecular markers for the crown rust resistance genes Pc38, Pc39, and Pc48 in cultivated oat (Avena sativa L.) Molecular Breeding 14:349-361.
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439335 BE439366 CDO1090_WHE05F10.s1 CN180767
Polymorphism
CDO1090 EcoRV CDO1090 XbaI CDO1090 EcoRI CDO1090 HindIII CDO1090 DraI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
0.9
GrainGenes Marker Report: cdo1090d
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
| ||||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
| ||||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
| ||||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
|