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GrainGenes Marker Report: Xwmc522

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Locus
Xwmc522
Type
Microsatellite
Chromosome
2A
Map
Wheat, UC1110 x PI610750 2A76.9
Wheat, WH542 x Synthetic 2A77.8
Wheat-Composite2004-2A55
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Wheat, UC1110 x PI610750
Wheat, WH542 x Synthetic
Probe
WMC522
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
Possible Orthologs
Xwmc522-2A
wmc522-2A
wmc522
wmc522-3D



Probe for Locus
WMC522
Locus
Xwmc522-2A
Xwmc522
wmc522-2A
wmc522
wmc522-3D
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 22h5
Donor: Bright, Zeneca
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 207 bases located on 2A
Trimmed to insert at both ends. (CT)36 74 to 145, (TC)4 163 to 170.
Type
PCR
SSR
PCR primers
Forward AAAAATcTcAcgAgTcgggc at 5 length 20 bases, Tm 63
Reverse cccgAgcAggAgcTAcAAAT at 178 length 20 bases, Tm 63
SSR size
193 bases expected, Chinese Spring
Amplification Conditions
61C anneal, polymorphic on acrylamide (180-200 bases).
Sequence
WMC522
Source Species
Triticum aestivum