Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: Xgwm340-3B

[Submit comment/correction]

Locus	Xgwm340-3B
Type	Microsatellite
Chromosome	3B
Chromosome Arm	3BL
Map	Conan/Reeder-3B 216.507 [ Show all 13 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	Qsst.msub-3BL
Map Data	Durum wheat, Svevo x Ciccio [ Show all 14 ]
Species	Triticum aestivum
Probe	WMS340
Reference	Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114. Paillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242. Salina E et al. (2000) Microsatellite mapping of the induced sphaerococcoid mutation genes in Triticum aestivum Theoretical and Applied Genetics 100:686-689. Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source	Roeder, Marion S. 98.09.15
Remark	In Map Ta-Synthetic/Opata-SSR-3B, the interval most likely to contain locus is between Xtam63 and Xmwg11
Possible Orthologs	Xgwm340 Xgwm340-6R gwm340 gwm340-3B
Probe for Locus	WMS340
Locus	Xgwm340-3B Xgwm340 Xgwm340-6R gwm340 gwm340-3B
Reference	Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks	Insert contains repeat (GA)26 PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type	PCR SSR
PCR primers	5' GCAATCTTTTTTCTGACCACG 3' 5' ACGAGGCAAGAACACACATG 3'
Amplification Conditions	3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism	WMS340
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring