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GrainGenes Marker Report: Xcmwg652c-6R

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Locus	Xcmwg652c-6R
Type	RFLP
Chromosome	6R
Map	Secale-N6xN2-2004-6R 177.9
	[ Show Nearby Loci ]
Map Data	Rye, N6 x N2, 2004
Species	Secale cereale
Probe	cMWG652
Reference	Khlestkina EK et al. (2004) Mapping of 99 new microsatellite-derived loci in rye (Secale cereale L.) including 39 expressed sequence tags Theoretical and Applied Genetics 109:725-732.
Possible Orthologs	cMWG652 [ Show all 14 ]
Probe for Locus	cMWG652
Locus	Xcmwg652-6 [ Show all 19 ]
Reference	Abu Qamar M et al. (2008) A region of barley chromosome 6H harbors multiple major genes associated with net type net blotch resistance. Theoretical and Applied Genetics 117:1261-1270. Kunzel G et al. (2000) Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints Genetics 154:397-412. Graner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
General Remarks	Restriction enzyme informative in CAP analysis is HaeIII
Type	cDNA STS
STS primers	5' GAGCTGCTCGTTCTCGTTGA 5' CACACCTTCTTCTTCCTCTT
STS size	417
Amplification Conditions	STS annealing temperature 55-58 oC
Sequence	AJ234405 AJ234404 CMWG652-5 CMWG652-3
Linkage Group	6H 6
DNA Library	cMWG
Source Species	Hordeum vulgare
Source Tissue	Leaf
Insert Size	1