Query (optional)   in Class  

GrainGenes Marker Report: Xcfd89

[Submit comment/correction]

Locus
Xcfd89
Type
Microsatellite
Chromosome
4D
Map
Wheat-Composite2004-4D69
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
CFD89
Possible Orthologs
Xcfd89-4D



Probe for Locus
CFD89
Locus
Xcfd89-4D
Xcfd89
Reference
ReferenceGuyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks
Quality Score = C
Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems)
Amplifies motif: (GAAA)3
Regularity of motif is perfect
Type
PCR
SSR
PCR primers
Forward 5' TTAGCAGATAAGAGCTAAGCTATGG 3'
Reverse 5' GCAGTCTTTTTCCTGCGTTC 3'
SSR size
155
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
4D
Source Species
Aegilops tauschii