GrainGenes Marker Report: Xcfd80-6D
Locus
Xcfd80-6D
Type
Microsatellite
Chromosome
6D
Map
CS/SQ1-6D 93.4 Louise/Penawawa-6D 103.8 Ta-Courtot/CS-GPW-6D 25.7 Ta-SSR-2004-6D 59.5
[ Show Nearby Loci ]
Map Data
Wheat, Chinese Spring x SQ1 Wheat, Consensus SSR, 2004 Wheat, Courtot x Chinese Spring, GPW Wheat, Louise x Penawawa
Probe
CFD80
Reference
Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xcfd80 Xcfd80-6A cfd80 cfd80-6A cfd80-6D
Probe for Locus
CFD80
Locus
Xcfd80-6D
[ Show all 6 ]
Reference
General Remarks
Quality Score = B Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems) Amplifies motif: (GA)27 Regularity of motif is perfect
Type
PCR SSR
PCR primers
Forward 5' ATAGGGGTTTTGAATCACTCC 3'
Reverse 5' TTGGATTTGCAGAGCCTTCT 3'
SSR size
179
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
6D
Source Species
Aegilops tauschii
GrainGenes Marker Report: Xcfd80-6D
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
| ||||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
| ||||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
|