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GrainGenes Marker Report: Xcfd70-3D

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Locus
Xcfd70-3D
Type
Microsatellite
Map
Chinese_Spring_Deletion_SSR_3D-0.775
P91193D1/P92201D5-3D30.9
Ta-Courtot/CS-GPW-3D102.4
[ Show Nearby Loci ]
Breakpoint Interval
3DS6-0.55-1.00
Map Data
Wheat, Courtot x Chinese Spring, GPW
Wheat, P91193D1 x P92201D5
Wheat, Physical, SSR
Probe
CFD70
Possible Orthologs
Xcfd70
[ Show all 6 ]



Probe for Locus
CFD70
Locus
Xcfd70-3D
[ Show all 6 ]
Reference
ReferenceGuyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks
Quality Score = D
Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems)
Amplifies motif: (CA)19
Regularity of motif is perfect
Type
PCR
SSR
PCR primers
Forward 5' GTCGGCATAGTCGCACATAC 3'
Reverse 5' ACTATGCCAAGGGGAGTGTG 3'
SSR size
172
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
3D
Source Species
Aegilops tauschii