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GrainGenes Marker Report: Xcfd56-2D

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Locus	Xcfd56-2D
Type	Microsatellite
Chromosome	2D
Map	Chinese_Spring_Deletion_SSR_2D -0.735 Louise/Penawawa-2D 150 Ta-Courtot/CS-GPW-2D 0 Ta-SSR-2004-2D 6.6 Wheat-2008-Corrigin-CS(T2D)-2D 0
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Breakpoint Interval	2DS5-0.47-1.00
Map Data	Wheat 2008, Corrigin x CS(T2D), C gene Wheat, Consensus SSR, 2004 Wheat, Courtot x Chinese Spring, GPW Wheat, Louise x Penawawa Wheat, Physical, SSR
Probe	CFD56
Reference	Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs	Xcfd56 Xcfd56-2B cfd56 cfd56-2D
Probe for Locus	CFD56
Locus	Xcfd56-2D Xcfd56 Xcfd56-2B cfd56 cfd56-2D
Reference	Guyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks	Quality Score = B Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems) Amplifies motif: (GA)31 Regularity of motif is perfect
Type	PCR SSR
PCR primers	Forward 5' TTGCATAATTACTTGCCCTCC 3' Reverse 5' CTGGTCCAACTTCCATCCAT 3'
SSR size	221
Amplification Conditions	5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group	2D
Source Species	Aegilops tauschii