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GrainGenes Marker Report: Xcfd29-5D

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Locus	Xcfd29-5D
Type	Microsatellite
Chromosome	5D
Map	Chinese_Spring_Deletion_SSR_5D 0.88 [ Show all 7 ]
	[ Show Nearby Loci ]
Breakpoint Interval	5DL5-0.76-1.00
Map Data	Wheat, Conan x Reeder [ Show all 7 ]
Probe	CFD29
Reference	Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs	Xcfd29 cfd29
Probe for Locus	CFD29
Locus	Xcfd29-5D Xcfd29 cfd29
Reference	Guyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks	Quality Score = B Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems) Amplifies motif: (TC)18 Regularity of motif is perfect
Type	PCR SSR
PCR primers	Forward 5' GGTTGTCAGGCAGGATATTTG 3' Reverse 5' TATTGATAGATCAGGGCGCA 3'
SSR size	153
Amplification Conditions	5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group	5D
Source Species	Aegilops tauschii