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GrainGenes Marker Report: Xcfd257

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Locus
Xcfd257
Type
Microsatellite
Chromosome
4A
Map
Wheat-Composite2004-4A92
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Map Data
Wheat, Composite, 2004
Probe
CFD257
Possible Orthologs
Xcfd257-4A
cfd257



Probe for Locus
CFD257
Locus
Xcfd257-4A
Xcfd257
cfd257
Reference
ReferenceGuyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks
Quality Score = C
Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems)
Amplifies motif: (GAA)6
Regularity of motif is imperfect
Type
PCR
SSR
PCR primers
Forward 5' TCTCAACTTGCAACTGCCAC 3'
Reverse 5' CCCTCCATGGATTCTTGCTA 3'
SSR size
287
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
4A
Source Species
Aegilops tauschii