Query (optional)   in Class  

GrainGenes Marker Report: Xcfa2226b

[Submit comment/correction]

Locus
Xcfa2226b
Type
Microsatellite
Chromosome
1A
Map
Wheat-Composite2004-1A31
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
CFA2226
Possible Orthologs
cfa2226
Xcfa2226-1A
Xcfa2226-3B
cfa2226-1A



Probe for Locus
CFA2226
Locus
Xcfa2226-1A
Xcfa2226-3B
Xcfa2226b
cfa2226
cfa2226-1A
Reference
ReferenceSourdille P et al. (2001) Improvement of the genetic maps of wheat using new microsatellite markers Plant & Animal Genome IX Abstracts 167.
General Remarks
Quality Score = B
Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems)
Amplifies motif: (GCT)6
Regularity of motif is perfect
Type
PCR
SSR
PCR primers
Forward 5' GGAGAAAAGCAAACAGCGAC 3'
Reverse 5' CAGTAGCATCTTCCATGGCG 3'
SSR size
196
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
3B/1A
Source Species
Triticum urartu