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GrainGenes Marker Report: Xcfa2158b

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Locus
Xcfa2158b
Type
Microsatellite
Chromosome
1B
Chromosome Arm
1BS
Map
Tt-LxG-1B27.1
Wheat-Composite2004-1B21
[ Show Nearby Loci ]
Map Data
T. turgidum, Langdon x G18-16
Wheat, Composite, 2004
Probe
CFA2158
Possible Orthologs
Xcfa2158-1A
[ Show all 13 ]



Probe for Locus
CFA2158
Locus
Xcfa2158a
[ Show all 14 ]
Reference
ReferenceSourdille P et al. (2001) Improvement of the genetic maps of wheat using new microsatellite markers Plant & Animal Genome IX Abstracts 167.
General Remarks
Quality Score = C
Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems)
Amplifies motif: (CA)21
Regularity of motif is perfect
Type
PCR
SSR
PCR primers
Forward 5' TTTCGTCTTCAAAATGCACTG 3'
Reverse 5' TGGTAGCTTACAAAGGTGCG 3'
SSR size
229
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
1A/1B/1D
Source Species
Triticum urartu