GrainGenes Marker Report: Xbarc80-1B
Locus
Xbarc80-1B
Type
Microsatellite
Chromosome
1B
Chromosome Arm
1BL
Map
Chinese_Spring_Deletion_SSR_1B 0.925 Kofa/UC1113-1B 144.4 Ta-SSR-2004-1B 106.3 Ta-Synthetic/Opata-BARC-1B 103.9 USG3209/Jaypee-1B 215
[ Show Nearby Loci ]
Breakpoint Interval
1BL3-0.83-1.00 1BL3-0.85-1.00
Map Data
Durum wheat, Kofa x UC1113 Wheat, Consensus SSR, 2004 Wheat, Physical, SSR Wheat, Synthetic x Opata, BARC Wheat, USG3209 x Jaypee
2 Point Data
Lr46/Xbarc80-1B Distance: 30 cM
Probe
BARC80
Reference
Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xbarc80 barc80 barc80-1B barc080-1B
Probe for Locus
BARC80
Locus
Xbarc80-1B Xbarc80 Xbarc080-1B barc80 barc80-1B
General Remarks
Contains motif : (GAA)12 BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR SSR
PCR primers
5' GCGAATTAGCATCTGCATCTGTTTGAG 3'
5' CGGTCAACCAACTACTGCACAAC 3'
Amplification Conditions
Annealing temperature = 52
Sequence
BV211687
Source Species
Triticum aestivum
GrainGenes Marker Report: Xbarc80-1B
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