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GrainGenes Marker Report: PSR170

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Locus
psr170
Type
RFLP
Chromosome
3 (3H)
Map
Hordeum-Bins-3H123
Hordeum-TxE-3H266.3
Physical-3B80.38
[ Show Nearby Loci ]
QTL with Locus Marker
QPc.TaER-3H.3
Map Data
3B Physical
Barley, BinMap 2005
Barley, TxE
Probe
PSR170
Associated Gene
sdw1 (Hordeum)
Gene Class
Semidwarf
Reference
ReferenceLaurie DA et al. (1993) Assignment of the denso dwarfing gene to the long arm of chromosome 3(3H) of barley by use of RFLP markers. Plant Breeding 111:198-203.
Remark
The PSR170 RFLP/STS is a gene marker for the sdw1 (Hordeum) gene
Possible Orthologs
Xpsr170
[ Show all 18 ]



Gene Associated with Locus
sdw1 (Hordeum)
Full Name
Semidwarf 1 (Denso)
Gene Class
Semidwarf
Locus
psr170
sdw1
URL
Gene report page at the International Database for Barley Genes and Barley Genetic Stocks (NordGen)
Chromosome
3H
Data Source
Franckowiak, Jerome D.96.10



Probe
PSR170
Locus
psr170
[ Show all 30 ]
Remarks
Polymorphism scores are given as the percent polymorphic pairwise comparisons, followed by the number of alleles found and number of varieties tested in parentheses.
Type
cDNA
Sequence
PSR170 Forward
PSR170 Reverse
Copy Number
2
Background
0
Cross hybridizes to
Secale cerealegood
Hordeum vulgaregood
Polymorphism
PSR170 H EcoRV41.0 (3, 13)
PSR170 H DraI83.3 (3, 4)
PSR170 R EcoRV
Gel
PSR170 Gale
Linkage Group
3AL
[ Show all 8 ]
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Source Tissue
Leaf
Insert Size
1.2