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GrainGenes Marker Report: PCR1
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Locus
Pcr1

Type
RFLP

Synonym
Synonym pHvDF1

Chromosome
2H

Chromosome Arm
2HL

Map
Barley-Consensus-2H 70.4

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[ Show Nearby Loci ]

QTL with Locus Marker
QGpc.StMo-2H.3
QLg.StMo-2H.2

Map Data
Barley consensus

[ Show all 15 ]

Probe
pHvDF1

Candidate Gene
Pcr1 (Hordeum)

Reference

Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.

Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.

Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.

Data Source
Blake, Tom 05.04.19

Remark
Number of populations contributing to the placement of Pcr1 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex

Probe for Locus
pHvDF1

Locus
Pcr2
Pcr1
Pcr2-1H

Reference

Schulz R et al. (1989) Nucleotide sequence of a complementary DNA coding for the NADPH-protochlorophyllide oxidoreductase PCR of barley Hordeum-vulgare L. and its expression in Escherichia-coli Molecular and General Genetics 217:355-361.

Steinmuller K et al. (1986) The light-induced greening of barley Molecular Form and Function of the Plant Genome 83:277-290.

Apel K et al. (1983) The light-dependent control of chloroplast development in barley (Hordeum vulgare L.) Journal of Cellular Biochemistry 23:181-189.

Type
cDNA

Linkage Group
2

Source Gene Class
NADPH protochlorophyllide oxidoreductase

Source Gene
Pcr1 (Hordeum)

Source Species
Hordeum vulgare

Insert Size
0.524
0.6