GrainGenes Marker Report: MWG949B
Locus
MWG949B
Type
RFLP
Chromosome
2H
Map
Hordeum-Bins-2H 66
[ Show all 6 ]
[ Show Nearby Loci ]
Map Data
Barley, BinMap 2005
[ Show all 6 ]
Probe
MWG949
Reference
Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Oregon Wolfe Dom x Rec
Possible Orthologs
MWG949 MWG949A MWG949a-2H Xmwg949 Xmwg949-2R
Probe for Locus
MWG949
Locus
MWG949
[ Show all 6 ]
Synonym
Synonym HAR35_19354
General Remarks
MWG949 comes from a digest of MWG950 plasmid DNA and excising the 1.8 kb fragment.
Type
Genomic STS
STS primers
5' CGGCTGGTAAATGAACTGAA
5' GGCTTCCGCTACTACGTCTT
STS size
ca. 1800
Amplification Conditions
STS annealing temperature 52-55 oC
Sequence
AJ234667 AJ234666 MWG949-5 MWG949-3
Linkage Group
2
Insert Enzyme
PstI
Source Species
Hordeum vulgare
Insert Size
1.8
GrainGenes Marker Report: MWG949B
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