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GrainGenes Marker Report: Ltp1

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Gene	ltp1
Gene Product	non-specific lipid transport protein 1 non-specific lipid transport protein 1 precursor
Sequence	AM901399 AM901399_1.cds
Locus	Ltp1
Type	Gene RFLP
Synonym	Synonym Ltp1 (Hordeum)
Chromosome	5H
Chromosome Arm	5HS
Map	Barley-Consensus-5H -3.2 [ Show all 15 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 15 ]
Species	Hordeum vulgare
Probe	A1f
Associated Gene	Ltp1 (Hordeum)
Gene Class	Lipid transfer protein
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Probe for Locus	A1f
Locus	Ltp1 Ltp1-5H
Synonym	Other name Alf Ltp1 Synonym HAR35_37326 HAR35_42600
External Databases	DDBJ EMBL GenBank
Reference	Skriver K et al. (1992) Structure and expression of the barley lipid transfer protein gene LTP1 Plant Molecular Biology 18:585-589. Mundy J and Rogers JC (1986) Selective expression of a probable Amylase-protease inhibitor in barley Hordeum-vulgare aleurone cells comparison to the barley Amylase-subtilisin inhibitor Planta 169:51-63.
General Remarks	ORF 351 bp interrupted by 133 bp intron. Original cDNA sequence published in Planta is identical to the ORF sequence determined from the genomic clone. Appears to be a single copy gene. However, several weakly hybridizing bands indicate that there are other related sequences in the barley genome.
Sequence	X60292
Linkage Group	Barley 7 (5H), near centromere
Source Gene Class	Lipid transfer protein
Source Gene	Ltp1 (Hordeum)
Source Species	Hordeum vulgare
Insert Size	0.6