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GrainGenes Marker Report: IWB5916

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Locus	IWB5916
Type	SNP
Synonym	Other name BS00003881 BS00003881_51 Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Chromosome Arm	6A
Map	Wheat, Yr genes and QTL 6A 29.2 Wheat, Yr genes and QTL 6B 24.1 Wheat_2014_90KSNP_6A 74.2376 Wheat_AB, Colosseo x Lloyd 6B 59.9 Wheat_AB_2015_Consensus-6B 58.6
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Map Data	Wheat, Yr genes and QTL Wheat_2014_90KSNP Wheat_AB, Colosseo x Lloyd Wheat_AB_2015_Consensus
Species	Triticum aestivum
Probe	BS00003881_51
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Possible Orthologs	IWB5916-6A IWB5916-6B
Probe	BS00003881_51
Locus	IWB5916 BS00003881 BS00003881_51 IWB5916-6A IWB5916-6B
Related Probe	AX-94999389 BA00728402
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796. Allen AM et al. (2011) Transcipt-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.) Plant Biotechnology Journal 9:1086-1099.
Type	SNP KASP
PCR primers	FAM 5' GATGGCAATCCGATGAACATCTTATTTA 3' Common 5' GCTTTGTTCAACCAGCTCTAATGTGAATT 3' VIC 5' ATGGCAATCCGATGAACATCTTATTTG 3' Common 5' GCTTTGTTCAACCAGCTCTAATGTGAATT 3'
Specificity	FAM primer specific to A allele, and VIC primer specific to G allele.
Sequence	BS00003881_51