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GrainGenes Marker Report: His3A

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Locus
His3A
Type
Gene
RFLP
Synonym
Synonymgsh3 (Hordeum)
Chromosome
7H
Map
Barley-Consensus2-7H19.7
[ Show all 12 ]
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 14 ]
Probe
pc1-340
Associated Gene
gsh3 (Hordeum)
Gene Class
Eceriferum (glossy)
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceKleinhofs A (2000) Coordinator's report: integrating molecular and morphological/physiological marker maps. [electronic resource] Barley Genetics Newsletter 32:152-159.
Remark
Number of populations contributing to the placement of His3A in the Barley, Consensus 2006 DArT maps = 1
The His3A RFLP/STS is a gene marker for the gsh3 (Hordeum) gene
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
His3B
His3C
His3D


Probe for Locus
pc1-340
Locus
His3B
His3A
His3C
His3D
His3b-1H
Reference
ReferenceChojecki J (1986) Identification and characterization of a complementary DNA clone for histone h-3 in barley. Carlsberg Research Communications 51:211-218.
Linkage Group
Barley 1 (7H)
2
Source Gene Class
Histone H3
Source Species
Hordeum vulgare
Insert Size
0.5