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GrainGenes Marker Report: HVBKASI

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Locus	HVBKASI
Type	Gene Microsatellite
Synonym	Synonym HVBKASI
Chromosome	2H
Chromosome Arm	2HL
Map	Barley, B73xCPI-2H 71.7 [ Show all 13 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QFhs.umn-2H.2 QHD.umn-2H.1 QHea.pil-2H.3 QHt.HaMo-2H.2 QTgw.pil-2H.3
Map Data	Barley, Abiotic QTL Consensus [ Show all 13 ]
Probe	HVBKASI
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Mesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Probe	HVBKASI
Locus	HVBKASI
Reference	Hearnden PR et al. (2007) A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theoretical and Applied Genetics 115:383-391. Becker J and Heun M (1995) Barley microsatellites: allele variation and mapping Plant Molecular Biology 27:835-845.
Remarks	PCR size is expected size (kb) based on published sequence. Insert contains repeats (C)10 and (A)11.
Type	PCR SSR
PCR primers	5' ATTGGCGTGACCGATATTTATGTTCA 3' 5' CAAAACTGCAGCTAAGCAGGGGAACA 3' ATTGGCGTGACCGATATTTATGTTCA CAAAACTGCAGCTAAGCAGGGGAACA
SSR size	0.197
Sequence	M95172
Source Gene Class	beta-ketoacyl-ACP synthase I
Source Species	Hordeum vulgare