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GrainGenes Marker Report: GMS21

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Locus	GMS21
Type	Microsatellite
Synonym	Synonym GMS021
Chromosome	1H
Map	Hordeum-Consensus2006-DArT-1H 21.1 Hordeum-Pillen-1H 17
	[ Show Nearby Loci ]
QTL with Locus Marker	QHea.pil-1H.1 QKer.pil-1H QYld.pil-1H
Map Data	Barley, AxHs/QTL Barley, Consensus 2006, DArT
Probe	GMS21
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Remark	Number of populations contributing to the placement of GMS21 in the Barley, Consensus 2006 DArT maps = 1
Probe	GMS21
Locus	GMS0021 GMS021 GMS21
Reference	Hearnden PR et al. (2007) A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theoretical and Applied Genetics 115:383-391. Struss D and Plieske J (1998) The use of microsatellite markers for detection of genetic diversity in barley populations. Theoretical and Applied Genetics 97:308-315.
Remarks	Annealing temperature = 55 deg C Insert contains repeat (ga)17(ga)7
Type	SSR
PCR primers	5' CTATCACACGACGCAACATG 5' CCTGAGAAAGAAAGCGCAAC CTATCACACGACGCAACATG CCTGAGAAAGAAAGCGCAAC
SSR size	169