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GrainGenes Marker Report: GMS056

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Locus	GMS056
Type	Microsatellite
Synonym	Synonym GMS56
Chromosome	7H
Map	Barley-ConsensusFHB-7H 77.8 [ Show all 7 ]
	[ Show Nearby Loci ]
Map Data	Barley, Abiotic QTL Consensus [ Show all 7 ]
Species	Hordeum spontaneum Hordeum vulgare
Probe	GMS056 GMS56
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Struss D and Plieske J (1998) The use of microsatellite markers for detection of genetic diversity in barley populations. Theoretical and Applied Genetics 97:308-315.
Remark	Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum Insert contains repeat (GA)11 Developing laboratory = IPK (D. Struss)
Probe for Locus	GMS56
Locus	GMS056
Reference	Struss D and Plieske J (1998) The use of microsatellite markers for detection of genetic diversity in barley populations. Theoretical and Applied Genetics 97:308-315.
General Remarks	Annealing temperature = 60 deg C Insert contains repeat (ga)11
Type	SSR
PCR primers	5' GAGAAACGCAGCTGTGGC 5' GTCACCGAGGCCTTCCTC
SSR size	137