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GrainGenes Marker Report: GMS027

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Locus	GMS027
Type	Microsatellite
Chromosome	5H
Map	Barley-ConsensusFHB-5H 145.73 Hordeum-Consensus2007-SSR-5H 135.91 Hordeum-Lx41-5H 33 Hordeum-LxHs-5H 148 Hv-Integrated2009-5H 131.9
	[ Show Nearby Loci ]
Map Data	Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, Lx41 Barley, LxHs
Species	Hordeum spontaneum Hordeum vulgare
Probe	GMS27
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Struss D and Plieske J (1998) The use of microsatellite markers for detection of genetic diversity in barley populations. Theoretical and Applied Genetics 97:308-315.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' [ Show all 6 ]
Probe for Locus	GMS27
Locus	GMS0027 GMS027 GMS27 GMS27A GMS27B
Reference	Hearnden PR et al. (2007) A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theoretical and Applied Genetics 115:383-391. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Struss D and Plieske J (1998) The use of microsatellite markers for detection of genetic diversity in barley populations. Theoretical and Applied Genetics 97:308-315.
General Remarks	Annealing temperature = 60 deg C Insert contains repeat (gt)5(ct)2(gt)27
Type	SSR
PCR primers	5' CTTTTTCTTTGACGATGCACC 5' TGAGTTTGTGAGAACTGGATGG CTTTTTCTTTGACGATGCACC TGAGTTTGTGAGAACTGGATGG
SSR size	154