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GrainGenes Marker Report: EBmac871

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Locus
EBmac871
Type
Microsatellite
Synonym
SynonymEBmac0871
Chromosome
3H
Map
Barley-consensus-2003-3H92
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Map Data
Barley consensus 2003
Probe
EBmac871
Data Source
Langridge, Peter J.
Possible Orthologs
EBmac0871



Probe
EBmac871
Locus
EBmac0871
EBmac871
Synonym
Other nameEBmac0871
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks
Insert contains repeat (TG)13
Quality = 2: Single product, relatively strong stutter bands
Diversity Index (DI) = 0.67
Type
PCR
SSR
PCR primers
5' TGCCTCTGTTGTGTTATTGT 3'
5' CCCCAAGTGAACATTGAC 3'
SSR size
180
Amplification Conditions
1 cycle of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 30 cycles of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 1 cycle of 5 mins @ 72C.
Source Species
Hordeum vulgare