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GrainGenes Marker Report: EBmac785

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Locus
EBmac785
Type
Microsatellite
Synonym
SynonymEBmac0785
Probe
EBmac785
Possible Orthologs
EBmac0785



Probe
EBmac785
Locus
EBmac0785
EBmac785
Synonym
Other nameEBmac0785
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks
Insert contains repeat (TA)9(GT)22
Quality = 2: Single product, relatively strong stutter bands
Diversity Index (DI) = 0.55
Type
PCR
SSR
PCR primers
5' AATTGCAAGCACTATATATATA 3'
5' ATCCAGCTAGACACATACATATT 3'
SSR size
105
Amplification Conditions
1 cycle of 1 min @ 94C, 1 min @ 53C, 1 min @ 72C, 30 cycles of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 1 cycle of 5 mins @ 72C, 2.5 nM of MgCl2
Source Species
Hordeum vulgare