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GrainGenes Marker Report: EBmac737

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Locus
EBmac737
Type
Microsatellite
Synonym
SynonymEBmac0737
Chromosome
4H
Map
Hordeum-Consensus2006-DArT-4H69.7
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Map Data
Barley, Consensus 2006, DArT
Probe
EBmac737
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Remark
Number of populations contributing to the placement of EBmac737 in the Barley, Consensus 2006 DArT maps = 1
Possible Orthologs
EBmac0737



Probe
EBmac737
Locus
EBmac0737
EBmac737
Synonym
Other nameEBmac0737
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks
Insert contains repeat (TG)17
Quality = 4: Ladders of bands that are at equal intensity, but may contain scoreable weak products
Type
PCR
SSR
PCR primers
5' AGTTGGTGACAGCCAAATA 3'
5' TTCTAAGGCAGCTCAACC 3'
SSR size
160
Amplification Conditions
1 cycle of 1 min @ 94C, 1 min @ 53C, 1 min @ 72C, 30 cycles of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 1 cycle of 5 mins @ 72C, 2.5 nM of MgCl2
Source Species
Hordeum vulgare