Query (optional)   in Class  

GrainGenes Marker Report: EBmac623

[Submit comment/correction]

Locus
EBmac623
Type
Microsatellite
Synonym
SynonymEBmac0623
Chromosome
2H
Map
Barley-consensus-2003-2H72.8
[ Show Nearby Loci ]
Map Data
Barley consensus 2003
Probe
EBmac623
Data Source
Langridge, Peter J.
Possible Orthologs
EBmac0623



Probe
EBmac623
Locus
EBmac0623
EBmac623
Synonym
Other nameEBmac0623
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks
Insert contains repeat (TG)11,(GA)10,(AG)7
Quality = 1: Single product, only weak stutter bands
Type
PCR
SSR
PCR primers
5' CGAACATTGTCGTGTTAGTAA 3'
5' CTGTCATGCATAACCTATGG 3'
SSR size
154
Amplification Conditions
1 cycle of 3 min @ 94C, 1 min @ 58C, 1 min @ 72C, 30 cycles of 30 secs @ 94C, 30 secs @ 58C, 30 secs @ 72C, 1 cycle of 5 mins @ 72C.
Source Species
Hordeum vulgare