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GrainGenes Marker Report: EBmac607

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Locus
EBmac607
Type
Microsatellite
Chromosome
2H
Map
Barley-consensus-2003-2H64.7
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Map Data
Barley consensus 2003
Probe
EBmac607
Data Source
Langridge, Peter J.
Possible Orthologs
EBmac0607
EBmac607b



Probe
EBmac607
Locus
EBmac0607
EBmac607
EBmac607b
Synonym
Other nameEBmac0607
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks
Insert contains repeat (TG)7,(TG)6(GA)10,(AG)6
Quality = 1: Single product, only weak stutter bands
Diversity Index (DI) = 0.38
Type
PCR
SSR
PCR primers
5' GCGAACATTGTCATGTTAGTA 3'
5' AACCTTATGGATTTGGAGG 3'
SSR size
146
Amplification Conditions
1 cycle of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 30 cycles of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 1 cycle of 5 mins @ 72C.
Source Species
Hordeum vulgare