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GrainGenes Marker Report: EBmac558

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Probe
EBmac558
Locus
EBmac0558
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks
Insert contains repeat (AC)7
Quality = 2: Single product, relatively strong stutter bands
Diversity Index (DI) = 0.18
Type
PCR
SSR
PCR primers
5' GTGTGTGGTATATGTGTGTTTG 3'
5' TAGCTACACATACAAACTTGCA 3'
GTGTGTGGTATATGTGTGTTTG
TAGCTACACATACAAACTTGCA
SSR size
160
Amplification Conditions
1 cycle of 3 min @ 94C, 1 min @ 58C, 1 min @ 72C, 30 cycles of 30 secs @ 94C, 30 secs @ 58C, 30 secs @ 72C, 1 cycle of 5 mins @ 72C.
Source Species
Hordeum vulgare