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GrainGenes Marker Report: EBmac0540

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Locus	EBmac0540
Type	Microsatellite
Chromosome	4H
Map	Barley-ConsensusFHB-4H 69.31 Hordeum-Consensus2007-SSR-4H 58.51 Hordeum-LxHs-4H 42
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Map Data	Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, LxHs
Species	Hordeum spontaneum Hordeum vulgare
Probe	Bmac0540 EBmac540
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Ramsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remark	Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum Insert contains repeat (AC)8 Polymorphic Information Content (PIC) = 0.26 Developing laboratory = SCRI (R. Waugh)
Possible Orthologs	Bmac0540
Probe for Locus	Bmac0540
Locus	EBmac0540 Bmac0540
Synonym	Other name EBmac540
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Ramsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Type	SSR
PCR primers	TGTGTAGGTGTAGATGGTGTG TTGTCACACTAACATAGAGAAATG