Query (optional)   in Class  

GrainGenes Marker Report: EBmac0525b

[Submit comment/correction]

Locus
EBmac0525b
Type
Microsatellite
Map
Hv-Integrated2009-2H68
[ Show Nearby Loci ]
Map Data
Barley, Integrated, Marcel 2009
Probe
EBmac525
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Possible Orthologs
Bmac0525
EBmac0525



Probe for Locus
EBmac525
Locus
EBmac0525
EBmac0525b
Synonym
Other nameEBmac0525
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
General Remarks
Insert contains repeat (AC)14
Quality = 3: Strong major polymorphic product, with additional strong bands. Multi-locus or weak but scoreable products
Type
PCR
SSR
PCR primers
5' TGACAGTGTCTCCAGTAATGA 3'
5' GTTTGTTCTTTTGATTTTGTTG 3'
SSR size
149
Amplification Conditions
1 cycle of 3 min @ 94C, 1 min @ 58C, 1 min @ 72C, 30 cycles of 30 secs @ 94C, 30 secs @ 58C, 30 secs @ 72C, 1 cycle of 5 mins @ 72C.
Source Species
Hordeum vulgare