Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: CDO1396A

[Submit comment/correction]

Locus	CDO1396A
Type	RFLP
Chromosome	3 (3H)
Map	Hordeum-TxE-3H 257.7
	[ Show Nearby Loci ]
QTL with Locus Marker	QHt.TaER-3H.3
Map Data	Barley, TxE
Probe	CDO1396
Homology	RS1A_ARATH e-value: 1e-11 40S RIBOSOMAL PROTEIN S15A thaliana] Arabidopsis thaliana gb|L27461. EST gb|R30315 comes from this gene. thaliana] RS1A_ARATH e-value: 1e-68 40S RIBOSOMAL PROTEIN S15A thaliana] Arabidopsis thaliana gb|L27461. EST gb|R30315 comes from this gene. thaliana]
Possible Orthologs	CDO1396 CDO1396B Xcdo1396 Xcdo1396sc cdo1396
Probe for Locus	CDO1396
Locus	CDO1396 [ Show all 6 ]
Synonym	Synonym HAR35_15083 HAR35_15084
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BE439156 BE439225 CDO1396_WHE03D06.s1 CDO1396_WHE03D06.r1
Polymorphism	CDO1396 DraI
Linkage Group	1L, 3L
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	0.8
PCR size	0.8