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GrainGenes Marker Report: CDO1380a

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Locus	CDO1380a
Type	RFLP
Synonym	Synonym cdo1380
Chromosome	5H
Map	Hordeum-Bins-5H 176.9 [ Show all 6 ]
	[ Show Nearby Loci ]
Map Data	Barley, Abiotic QTL Consensus [ Show all 6 ]
Probe	CDO1380
Homology	CAC05452.1 e-value: 1e-17 (AL391712) putative protein [Arabidopsis thaliana]
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Possible Orthologs	cdo1380 [ Show all 8 ]
Probe for Locus	CDO1380
Locus	CDO1380a [ Show all 20 ]
Synonym	Other name CD1380 Synonym HAR35_17894
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BE439201 CDO1380_WHE03D03.r1 AA231833 AA231886
Polymorphism	CDO1380 EcoRI CDO1380 DraI
Linkage Group	6L
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.2
PCR size	1.2