GrainGenes Marker Report: CDO1312B
Locus
CDO1312B
Type
RFLP
Synonym
Other name cdo1312b
Chromosome
4B 4D
Chromosome Arm
4BL 4DL
Map
Oat-2009-KxO_5_30 67 Oat-2016-Consensus-1 17.4 Oat-2016-KxO_2 15 Oat-2018-Consensus_Mrg01 17.4 Oat-KxO/2003-5 69.8
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003
[ Show all 6 ]
Species
Avena sativa Avena sativa L.
Probe
CDO1312
Homology
AF295664_1 e-value: 9e-05 (AF295664) CBL-interacting protein kinase 9 [Arabidopsis thaliana] AF339147_1 e-value: 4e-33 (AF339147) SOS2-like protein kinase PKS5 [Arabidopsis thaliana]
Remark
Marker placement value = 12.40 cM on map Oat-KxO/2003-5 Marker is not a framework marker on map Oat-KxO/2003-5
Possible Orthologs
CDO1312
[ Show all 29 ]
Probe for Locus
CDO1312
Locus
Xcdo1312-4B
[ Show all 33 ]
Synonym
Synonym HAR35_1447 HAR35_1448
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439333 BE439364 CDO1312_WHE05E12.s1
Polymorphism
CDO1312 XbaI
Linkage Group
1BL4BL4DL5AL
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.4
PCR size
1.4
GrainGenes Marker Report: CDO1312B
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