GrainGenes Marker Report: CDO1174B
Locus
CDO1174B
Type
RFLP
Map
Oat-2009-KxO_4_12_13 54 Oat-2016-Consensus-23 61.2 Oat-2018-Consensus_Mrg23 61.2 Oat-KxO/2003-13 11.5
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003 Oat-2009-KxO Oat-2016-Consensus Oat-2018-Consensus Wheat chromosome arm map
Species
Avena sativa
Probe
CDO1174
Homology
CAC35389.1 e-value: 3.7 (AJ400879) KIAA0298 protein [Homo sapiens] BAB08509.1 e-value: 5e-32 (AB006707) DNA excision repair cross-complementing protein; similar to human Xeroderma pigmentosum group B DNA repair protein [Arabidopsis thaliana]
Remark
Marker placement value = 1.45 cM on map Oat-KxO/2003-13 Marker is not a framework marker on map Oat-KxO/2003-13
Possible Orthologs
CDO1174
[ Show all 10 ]
Probe for Locus
CDO1174
Locus
Xcdo1174-3
[ Show all 13 ]
Synonym
Synonym HAR35_27737
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type
cDNA Genomic
Sequence
BE439179 BE439248 CDO1174_WHE03D09.s1 CDO1174_WHE03D09.r1
Polymorphism
CDO1174 EcoRI CDO1174 DraI
Linkage Group
3L [b 3SH] 3L [b 3S]
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
2
PCR size
2
GrainGenes Marker Report: CDO1174B
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