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GrainGenes Marker Report: BCD855

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Locus
bcd855
Type
RFLP
Chromosome
2A
2B
2D
Chromosome Arm
2BS
2DS
Map
Oat-OxT-670
Rice-CU-727.7
[ Show Nearby Loci ]
Map Data
Oat, OxT
Rice, BxOl
Wheat chromosome arm map
Probe
BCD855
Homology
AAG37879.1e-value: 7e-11(AF303397) calmodulin-binding protein [Arabidopsis thaliana]
AF096260_1e-value: 3e-21(AF096260) ER66 protein [Lycopersicon esculentum]
Possible Orthologs
Xbcd855
[ Show all 8 ]



Probe
BCD855
Locus
Xbcd855-2
[ Show all 11 ]
Synonym
SynonymHAR35_5518
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Lambda ZAP II library
Bar.LambZAPII [c]
Bar.LambZAPII
Type
cDNA
Sequence
BE438987
BE439016
BCD855_WHE05B08.s1
BCD855-5
Polymorphism
BCD855 EcoRI
Linkage Group
2S
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
0.7
PCR size
0.7