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GrainGenes Marker Report: BCD351e

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Locus
BCD351e
Type
RFLP
Synonym
SynonymBCD351
Chromosome
5H
Map
Barley-Consensus2-5H94.7
[ Show all 13 ]
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 13 ]
Probe
BCD351
Homology
BAA83564.1e-value: 1e-16(AP000399) ESTs C97429(C60159),D22427(C11106), AU078031(E31854),D15683(C1084) correspond to a region of the predicted gene.~hypothetical protein [Oryza sativa]
BAA83564.1e-value: 2e-11(AP000399) ESTs C97429(C60159),D22427(C11106), AU078031(E31854),D15683(C1084) correspond to a region of the predicted gene.~hypothetical protein [Oryza sativa]
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceLi JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Data Source
Blake, Tom05.04.19
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs
BCD351
[ Show all 18 ]
Probe for Locus
BCD351
Locus
BCD351C
[ Show all 31 ]
Synonym
SynonymHAR35_1862
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library
Bar.LambZAPII [c]
Type
cDNA
Sequence
BE438985
BE439015
BCD351_WHE05B06.s1
Linkage Group
[b 1H, 2H]
Barley 5 (1H)
4
Barley 7 (5H)
2
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
0.9
PCR size
0.9