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GrainGenes Marker Report: BCD298B

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Locus
BCD298B
Type
RFLP
Synonym
SynonymBCD298
Chromosome
5H
7H
Map
Barley-consensus-2003-5H68.1
[ Show all 9 ]
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 11 ]
Probe
BCD298
Homology
AF220539_1e-value: 2e-40(AF220539) 40s ribosomal protein S23 [Euphorbia esula]
AC016661_23e-value: 5e-05(AC016661) putative 40S ribosomal protein S23 [Arabidopsis thaliana]
AC016661_23e-value: 2e-40(AC016661) putative 40S ribosomal protein S23 [Arabidopsis thaliana]
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Langridge, Peter J.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
BCD0298
[ Show all 11 ]



Probe for Locus
BCD298
Locus
BCD298
[ Show all 14 ]
Synonym
SynonymHAR35_46443
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library
Bar.LambZAPII [c]
Type
cDNA
Sequence
BE438637
BE438694
BE438786
BCD298_WHE1A0111
BCD298_WHE1A0112
Linkage Group
[b 7L]
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
0.9
PCR size
0.9