GrainGenes Marker Report: BCD130
Locus
BCD130
Type
RFLP
Map
Barley-Consensus2-7H 13.4 Hordeum-Bins-7H 16 Tt-Gill-7D 38.1
[ Show Nearby Loci ]
Map Data
Barley consensus 2 Barley, BinMap 2005 T.tauschii
Probe
BCD130
Associated Gene
fch12 (Hordeum)
Homology
BAA94526.1 e-value: 2e-29 (AP001800) ESTs D40150(S1923),D41866(S4818),AU075911(S4818) correspond to a region of the predicted gene.~Similar to Arabidopsis thaliana chromosome 1, BAC F1K23; putative lipase (AC007508) [Oryza sativa] D40150(S1923),D41866(S4818),AU075911(S4818)~unknown protein [Oryza sativa]
Gene Class
Chlorina seedling (Hordeum)
Reference
Schmierer D et al. (2001) Fine mapping of the fch12 chlorina seedling mutant Barley Genetics Newsletter 31:12.
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin The BCD130 RFLP/STS is a gene marker for the fch12 (Hordeum) gene
Possible Orthologs
Xbcd130
[ Show all 6 ]
Gene Associated with Locus
fch12 (Hordeum)
Full Name
Chlorina seedling 12 (Chlorina seedling c)
Synonym
Synonym clo-fc (Hordeum) von Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.
f`c`
Gene Class
Chlorina seedling (Hordeum)
Locus
BCD130 fch12
URL
Gene report page at the International Database for Barley Genes and Barley Genetic Stocks (NordGen)
Chromosome
7H
Data Source
Franckowiak, Jerome D. 96.10
Probe
BCD130
Locus
Xbcd130-4A
[ Show all 9 ]
Synonym
Synonym HAR35_10203 HAR35_21129
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Lambda ZAP II library Bar.LambZAPII [c]
Type
cDNA
Sequence
BE438728 BCD130_WHE1C0021 BCD130_WHE1C0022
Polymorphism
BCD130 XbaI
Linkage Group
[b 1S]
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
1.6
PCR size
1.6
GrainGenes Marker Report: BCD130
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